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Predisposing Reinforcing And Enabling Factors

Written By Monday, October 24, 2022 Add Comment Edit
Exon count:
fourteen
Notation release Condition Associates Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (40694733..40732340)
110 current T2T-CHM13v2.0 (GCF_009914755.one) xv NC_060939.i (38500856..38538035)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.nine (40987372..41024538)

Chromosome 15 - NC_000015.10 Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene kinetochore scaffold 1 Neighboring gene RNA, 7SL, cytoplasmic 376, pseudogene Neighboring gene RAD51 antisense RNA 1 Neighboring gene regulator of microtubule dynamics 3 Neighboring gene uncharacterized LOC124903474 Neighboring gene SUMO2 pseudogene 15

NEW Try the new Transcript tabular array

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome note wheel, so their versions may non match the RefSeq versions in the current genome build. Identify version mismatches by comparison the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products in a higher place.

Genomic

  1. NG_012120.1 RefSeqGene

    Range
    5014..42180
    Download
    GenBank, FASTA, Sequence Viewer (Graphics), LRG_313

mRNA and Protein(s)

  1. NM_001164269.two → NP_001157741.i  DNA repair protein RAD51 homolog 1 isoform 2

    Run across identical proteins and their annotated locations for NP_001157741.ane

    Status: REVIEWED

    Clarification
    Transcript Variant: This variant (4) uses an alternate splice site in the 5' UTR, compared to variant two. Both variants two and 4 encode the same isoform.
    Source sequence(due south)
    AC012476, AC022405, AK131299
    Consensus CDS
    CCDS53931.1
    UniProtKB/Swiss-Prot
    Q06609
    Related
    ENSP00000372088.3, ENST00000382643.7
    Conserved Domains (3) summary
    cd01123
    Location: 116 → 336
    Rad51_DMC1_radA; Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a ...
    TIGR02239
    Location: 25 → 340
    recomb_RAD51; Deoxyribonucleic acid repair protein RAD51
    pfam14520
    Location: 32 → 77
    HHH_5; Helix-hairpin-helix domain

  2. NM_001164270.two → NP_001157742.1  DNA repair protein RAD51 homolog 1 isoform 3

    Meet identical proteins and their annotated locations for NP_001157742.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) uses an alternating exon in the 5' coding region and lacks an alternate exon in the 3' coding region resulting in a frameshift, compared to variant 2. The resulting isoform (three) contains a distinct segment near the N-terminus and has a shorter and distinct C-terminus, compared to isoform 2.
    Source sequence(due south)
    AC012476, D14134, EU362635
    Consensus CDS
    CCDS53932.1
    UniProtKB/Swiss-Prot
    Q06609
    Related
    ENSP00000406602.2, ENST00000423169.6
    Conserved Domains (1) summary
    TIGR02239
    Location: 25 → 258
    recomb_RAD51; Dna repair protein RAD51

  3. NM_002875.5 → NP_002866.2  Deoxyribonucleic acid repair poly peptide RAD51 homolog 1 isoform 1

    See identical proteins and their annotated locations for NP_002866.two

    Status: REVIEWED

    Description
    Transcript Variant: This variant (one) uses an alternate exon in the v' coding region, compared to variant 2. The resulting isoform (ane) contains a distinct segment near the North-terminus, compared to isoform 2.
    Source sequence(southward)
    AC012476, AK313503
    Consensus CDS
    CCDS10062.1
    UniProtKB/Swiss-Prot
    Q06609, Q9BV60
    Related
    ENSP00000267868.3, ENST00000267868.8
    Conserved Domains (1) summary
    TIGR02239
    Location: 25 → 339
    recomb_RAD51; DNA repair protein RAD51

  4. NM_133487.4 → NP_597994.iii  Deoxyribonucleic acid repair protein RAD51 homolog 1 isoform 2

    See identical proteins and their annotated locations for NP_597994.3

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) represents the longest transcript and encodes the longest isoform (2). Both variants 2 and iv encode the same isoform.
    Source sequence(southward)
    AC012476, AK291969
    Consensus CDS
    CCDS53931.1
    UniProtKB/Swiss-Prot
    Q06609
    Related
    ENSP00000493712.2, ENST00000645673.2
    Conserved Domains (3) summary
    cd01123
    Location: 116 → 336
    Rad51_DMC1_radA; Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a ...
    TIGR02239
    Location: 25 → 340
    recomb_RAD51; Deoxyribonucleic acid repair protein RAD51
    pfam14520
    Location: 32 → 77
    HHH_5; Helix-hairpin-helix domain

RefSeqs of Annotated Genomes: Homo sapiens Note Release 110 details...Open this link in a new tab

Predisposing Reinforcing And Enabling Factors,

Source: https://www.ncbi.nlm.nih.gov/gene/5888

Posted by: davisplefusbacce.blogspot.com

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